Bio::DB::Bam::Target -- Object representing the query portion of a BAM/SAM alignment in NATIVE alignment
This is identical to Bio::DB::Bam::Query, except that the dna, qscores and start and end positions are all given in the orientation in which the read was sequenced, not in the oreintation in which it was aligned.
To install Bio::DB::Bam, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::DB::Bam
CPAN shell
perl -MCPAN -e shell install Bio::DB::Bam
For more information on module installation, please visit the detailed CPAN module installation guide.