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Changes for version 0.1.1

Modules

gets sequences and performs mulitple alignement
identification of promoter elements in sequence ,sequences, or alignments
[One line description of module's purpose here]
identification of CpG islands, CG rich regions
identification core promoter elements via consensus sequences
Types of output files to be saved
pdf output file with visually tagged promoter elements via R
MSA output in text file format
specific sequences and colors to be associated with them
collection object of Sequences