obo_trimming.pl - This script trims a given branch of an OBO ontology.
obo_trimming.pl my_ontology.obo term_ids.txt > my_ontology_trimmed.obo
Trims an OBO-formatted ontology. The name of the term is used to filter out the branches that need be trimmed out.
Erick Antezana, <erick.antezana -@- gmail.com>
Copyright (c) 2006-2015 by Erick Antezana. All rights reserved.
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available.
To install OBO::Util::Set, copy and paste the appropriate command in to your terminal.
cpanm
cpanm OBO::Util::Set
CPAN shell
perl -MCPAN -e shell install OBO::Util::Set
For more information on module installation, please visit the detailed CPAN module installation guide.