Luis M. Rodriguez-R < lmrodriguezr at gmail dot com >
polloc_gel.pl - Draws the expected gel for a given set of amplicons.
This script is distributed under the terms of The Artistic License. See LICENSE.txt for details.
perl polloc_gel.pl arguments
perl polloc_gel.pl
The arguments must be in the following order:
GFF3 file containing the amplicons.
Example: /tmp/polloc-primers.out.amplif.1.gff
/tmp/polloc-primers.out.amplif.1.gff
Path to the base of the output files.
Example: /tmp/polloc-gel.out
/tmp/polloc-gel.out
The names of the genomes separated by colons (:). Alternatively, it can be an empty string ('') to assign genome names from files.
:
''
Example: Xci3:Xeu8:XamC
Xci3:Xeu8:XamC
Run perl polloc_gel.pl without arguments to see the help message.
Bio::Polloc::Locus::amplicon
Bio::Polloc::Typing::bandingPattern
To install Bio::Polloc, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Polloc
CPAN shell
perl -MCPAN -e shell install Bio::Polloc
For more information on module installation, please visit the detailed CPAN module installation guide.