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WebService-UMLSKS-Similarity-0.23
River stage zero No dependents
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/ ws-test

NAME

ws-test

SYNOPSIS

Basic Usuage

perl ws-test.pl --config configfilename --login loginfile --testfile test_file

--config : Instead of providing sources, relations and directions on command line, they can be specified using a configuration file, which can be provided with this option. It takes complete path and name of the file. The config file is expected in following format:

SAB :: include SNOMEDCT,MSH
REL :: include PAR,RB
DIR :: include U,H
RELA :: include RB-has_part

--login : User can specify login credentials through the file, which should be of form:

username :: xyz
password :: pqr

--testfile : User can specify the list of test CUIs stored in the test_file throught this option. The program would call getAllowablePath.pl for all the CUI pairs sequentially.

Follwing is a sample output

Enter username to connect to UMLSKS:mchoudhari
Enter password:
An output file output.txt would be generated.

DESCRIPTION

This program is used for testing a large data set. It accepts the test file as command line argument and sequentially calls getAllowablePath.pl for each test CUI pair.

SEE ALSO

ValidateTerm.pm GetUserData.pm Query.pm ConnectUMLS.pm

AUTHORS

Mugdha Choudhari University of Minnesota Duluth <chou0130 at d.umn.edu>

Ted Pedersen, University of Minnesota Duluth <tpederse at d.umn.edu>

COPYRIGHT

Copyright (C) 2011, Mugdha Choudhari, Ted Pedersen

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program; if not, write to The Free Software Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.