Bio::PhyloTastic::PruneOMatic - Prunes a megatree down to size
phylotastic PruneOMatic -i <infile> -t <taxa> -o <outfile>
This module prunes an input tree down to a specified set of taxa.
An input file. Required. Default is an adjacency table.
An output file name. If '-', prints output to STDOUT. Required.
A file with a list of taxa names to retain, one name per line. Required.
An input format, e.g. NEXUS, Newick, NeXML, PhyloXML, TaxList. Optional. Default is adjacency table.
An output format, e.g. NeXML, TaxList. Optional. Default is adjacency table.
To install Bio::PhyloTastic, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::PhyloTastic
CPAN shell
perl -MCPAN -e shell install Bio::PhyloTastic
For more information on module installation, please visit the detailed CPAN module installation guide.